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Molecule

5-Chloro-2′-Deoxyuridine

CAS: 50-90-8 · C9H11ClN2O5

2D Structure

3D Structure

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Basic Information

CAS Registry Number
50-90-8
Molecular Formula
C9H11ClN2O5
Molecular Mass
262.65 g/mol

Identifiers

CAS Registry Number

50-90-8

SMILES

O=c1nc(O)c(Cl)cn1[C@H]1C[C@H](O)[C@@H](CO)O1

InChI Key

NJCXGFKPQSFZIB-RRKCRQDMSA-N

InChI

InChI=1S/C9H11ClN2O5/c10-4-2-12(9(16)11-8(4)15)7-1-5(14)6(3-13)17-7/h2,5-7,13-14H,1,3H2,(H,11,15,16)/t5-,6+,7+/m0/s1

Names and Synonyms

  • 5-Chloro-2′-Deoxyuridine Systematic Name
  • Uridine, 5-chloro-2′-deoxy- Synonym
  • 5-Chloro-2′-deoxyuridine Synonym
  • 5-Chlorodeoxyuridine Synonym
  • 2′-Deoxy-5-chlorouridine Synonym
  • Chlorodeoxyuridine Synonym

All Properties

Comprehensive physical and chemical properties

Property Value Source
Molecular Mass 262.65 g/mol CAS Common Chemistry
262.649 g/mol RDKit
262.646 g/mol chempirical lib
Canonical SMILES O=C1NC(=O)N(C=C1Cl)C2OC(CO)C(O)C2 CAS Common Chemistry
InChI InChI=1S/C9H11ClN2O5/c10-4-2-12(9(16)11-8(4)15)7-1-5(14)6(3-13)17-7/h2,5-7,13-14H,1,3H2,(H,11,15,16)/t5-,6+,7+/m0/s1 CAS Common Chemistry
InChI Key InChIKey=NJCXGFKPQSFZIB-RRKCRQDMSA-N CAS Common Chemistry
Melting Point 174-178 °C (decomp) CAS Common Chemistry
Name 5-Chloro-2′-deoxyuridine CAS Common Chemistry
Heavy Atom Count 17 RDKit
Hydrogen Bond Acceptors 7 RDKit
6 RDKit
Hydrogen Bond Donors 3 RDKit
Rotatable Bonds 2 RDKit
Aromatic Ring Count 1 RDKit
Topological Polar Surface Area 104.81 Ų RDKit
111.35 Ų chempirical lib
LogP -0.7570000000000001 RDKit
-0.757 RDKit
Molar Refractivity 56.79140000000003 cm³/mol RDKit
Ring Count 2 RDKit
Formal Charge 0 RDKit
Fraction Csp3 0.5556 RDKit
0.56 chempirical lib
Exact Mass 262.035649132 g/mol RDKit

Spectral Data

NMR, IR, and Mass spectral data

Predicting NMR spectra...
10 ppm 9 8 7 6 5 4 3 2 1 0 ppm
Shift (ppm) Multiplicity Integration Assignment

Note: These NMR spectra are predicted computationally and may differ from experimental data. Predictions are based on chemical environment analysis.

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MW = 262.65 g/mol. Edit any field — others recompute live.

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