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Zebularine

CAS: 3690-10-6 | C9H12N2O5

2D Structure

3D Structure

Loading 3D structure...

Basic Information

CAS Registry Number: 3690-10-6
Molecular Formula: C9H12N2O5
Molecular Mass: 228.20 g/mol

Names and Synonyms:

Zebularine
2(1H)-Pyrimidinone, 1-β-D-ribofuranosyl-
1-β-D-Ribofuranosyl-2(1H)-pyrimidinone
4-Deoxyuridine
1-(β-D-Ribofuranosyl)-2-pyrimidone
Uridine, 4-deoxy-
Pyrimidin-2-one β-D-ribofuranoside
1-β-D-Ribofuranosyl-2-pyrimidinone
Zebularine
NSC 309132
1-(β-D-Ribofuranosyl)-1,2-dihydropyrimidin-2-one

Identifiers:

SMILES:
O=c1ncccn1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O
InChI:
InChI=1S/C9H12N2O5/c12-4-5-6(13)7(14)8(16-5)11-3-1-2-10-9(11)15/h1-3,5-8,12-14H,4H2/t5-,6-,7-,8-/m1/s1

Key Properties

Melting Point
183 °C CAS Common Chemistry

Spectral Data

NMR, IR, and Mass spectral data

1H NMR
13C NMR
Predicting NMR spectra...
10 ppm 9 8 7 6 5 4 3 2 1 0 ppm
Shift (ppm) Multiplicity Integration Assignment
200 ppm 180 160 140 120 100 80 60 40 20 0 ppm
Shift (ppm) DEPT Assignment

Note: These NMR spectra are predicted computationally and may differ from experimental data. Predictions are based on chemical environment analysis.

External Resources

All Properties

Comprehensive physical and chemical properties

Property Value Source
Molecular Mass 228.20 g/mol CAS Common Chemistry
228.204 g/mol RDKit
228.074621484 g/mol RDKit
Wikipedia Url https://en.wikipedia.org/wiki/Zebularine CAS Common Chemistry
Canonical SMILES O=C1N=CC=CN1C2OC(CO)C(O)C2O CAS Common Chemistry
InChI InChI=1S/C9H12N2O5/c12-4-5-6(13)7(14)8(16-5)11-3-1-2-10-9(11)15/h1-3,5-8,12-14H,4H2/t5-,6-,7-,8-/m1/s1 CAS Common Chemistry
InChI Key InChIKey=RPQZTTQVRYEKCR-WCTZXXKLSA-N CAS Common Chemistry
Melting Point 183 °C CAS Common Chemistry
Name Zebularine CAS Common Chemistry
Heavy Atom Count 16 RDKit
Hydrogen Bond Acceptors 7 RDKit
Hydrogen Bond Donors 3 RDKit
Rotatable Bonds 2 RDKit
Aromatic Ring Count 1 RDKit
Topological Polar Surface Area 104.81000000000002 Ų RDKit
LogP -2.1451999999999996 RDKit
Molar Refractivity 51.50640000000003 RDKit

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