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Molecule
5-Fluoro-2′-Deoxycytidine
CAS: 10356-76-0 · C9H12FN3O4
2D Structure
3D Structure
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Basic Information
- CAS Registry Number
- 10356-76-0
- Molecular Formula
- C9H12FN3O4
- Molecular Mass
- 245.21 g/mol
Identifiers
CAS Registry Number
10356-76-0
SMILES
N=c1nc(O)n([C@H]2C[C@H](O)[C@@H](CO)O2)cc1F
InChI Key
IDYKCXHJJGMAEV-RRKCRQDMSA-N
InChI
InChI=1S/C9H12FN3O4/c10-4-2-13(9(16)12-8(4)11)7-1-5(15)6(3-14)17-7/h2,5-7,14-15H,1,3H2,(H2,11,12,16)/t5-,6+,7+/m0/s1
Names and Synonyms
- 5-Fluoro-2′-Deoxycytidine Synonym
- Cytidine, 2′-deoxy-5-fluoro- Synonym
- 2′-Deoxy-5-fluorocytidine Synonym
- 5-Fluoro-2′-deoxycytidine Synonym
- Ro 5-1090 Synonym
- 5-Fluorodeoxycytidine Synonym
- NSC 48006 Synonym
All Properties
Comprehensive physical and chemical properties
| Property | Value | Source |
|---|---|---|
| Molecular Mass | 245.21 g/mol | CAS Common Chemistry |
| 245.20999999999998 g/mol | RDKit | |
| Canonical SMILES | O=C1N=C(N)C(F)=CN1C2OC(CO)C(O)C2 | CAS Common Chemistry |
| InChI | InChI=1S/C9H12FN3O4/c10-4-2-13(9(16)12-8(4)11)7-1-5(15)6(3-14)17-7/h2,5-7,14-15H,1,3H2,(H2,11,12,16)/t5-,6+,7+/m0/s1 | CAS Common Chemistry |
| InChI Key | InChIKey=IDYKCXHJJGMAEV-RRKCRQDMSA-N | CAS Common Chemistry |
| Melting Point | 163 °C | CAS Common Chemistry |
| Name | 5-Fluoro-2′-deoxycytidine | CAS Common Chemistry |
| Heavy Atom Count | 17 | RDKit |
| Hydrogen Bond Acceptors | 7 | RDKit |
| 6 | RDKit | |
| Hydrogen Bond Donors | 4 | RDKit |
| Rotatable Bonds | 2 | RDKit |
| Aromatic Ring Count | 1 | RDKit |
| Topological Polar Surface Area | 111.59 Ų | RDKit |
| 106.28 Ų | chempirical lib | |
| LogP | -1.1520300000000003 | RDKit |
| -1.152 | RDKit | |
| Molar Refractivity | 51.32410000000002 cm³/mol | RDKit |
| Ring Count | 2 | RDKit |
| Formal Charge | 0 | RDKit |
| Fraction Csp3 | 0.5556 | RDKit |
| 0.56 | chempirical lib | |
| Exact Mass | 245.081184084 g/mol | RDKit |
Spectral Data
NMR, IR, and Mass spectral data
Predicting NMR spectra...
10 ppm
9
8
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5
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3
2
1
0 ppm
| Shift (ppm) | Multiplicity | Integration | Assignment |
|---|
200 ppm
180
160
140
120
100
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40
20
0 ppm
| Shift (ppm) | DEPT | Assignment |
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Note: These NMR spectra are predicted computationally and may differ from experimental data. Predictions are based on chemical environment analysis.
External Resources
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MW = 245.21 g/mol. Edit any field — others recompute live.
Related
Related molecules
Other compounds with formula C9H12FN3O4.
